Draw y-axis — ccYaxis • circlizePlus

Object ccCellGeom will call the function circlize::circos.yaxis while drawing.

Usage

ccYaxis(
  side = c("left", "right"),
  at = NULL,
  labels = TRUE,
  tick = TRUE,
  labels.font = par("font"),
  labels.cex = par("cex"),
  labels.niceFacing = TRUE,
  tick.length = convert_x(1, "mm", sector.index, track.index),
  lwd = par("lwd"),
  col = par("col"),
  labels.col = par("col")
)

Arguments

side: add the y-axis on the left or right of the cell
at: If it is numeric vector, it identifies the positions of the ticks. It can exceed ylim value and the exceeding part would be trimmed automatically.
labels: labels of the ticks. The exceeding part would be trimmed automatically. The value can also be logical (either an atomic value or a vector) which represents which labels to show.
tick: Whether to draw ticks.
labels.font: font style for the axis labels
labels.cex: font size for the axis labels
labels.niceFacing: Should facing of axis labels be human-easy
tick.length: length of the tick
lwd: line width for ticks
col: color for the axes
labels.col: color for the labels

Value

Object ccCellGeom

Examples

library(circlizePlus)
cc <- ccPlot(sectors = letters[1:8], xlim = c(0, 1))
track <- ccTrack(ylim = c(0, 10))
cell <- ccCell(sector.index = "a") + ccYaxis(side = "left")
#> Warning: `convert_unit_in_data_coordinate()` only works when aspect of the
#> coordinate is 1.
#> Error in ccYaxis(side = "left"): object 'sector.index' not found
track <- track + cell
#> Error: object 'cell' not found
cc + track