Package index
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ccArrow() - Draw an arrow
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ccBarplot() - Draw barplots
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ccBoxplot() - Draw boxplots
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ccCell-class - S4 class ccCell
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ccCell() - Generate a cell container that belongs to a particular sector
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ccCellGeom-class - S4 class ccCellGeom
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ccCells-class - S4 class ccCells
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ccCells() - Generate a list of multiple object ccCell-class
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ccDendrogram() - Draw dendrogram plots in a track
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ccGenomicAxis() - Add genomic axes
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ccGenomicCellGeom-class - S4 class ccGenomicCellGeom
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ccGenomicDensity() - Create a track of density plot
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ccGenomicHeatmap() - Define a heatmap track for genomic graph
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ccGenomicIdeogram() - Define an ideograms track for genomic graph
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ccGenomicLabels() - Add labels to specific genomic track
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ccGenomicLines() - Add lines for genomic data visualization
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ccGenomicLink-class - S4 class ccGenomicLink
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ccGenomicLink() - Add links between two sets of genomic positions
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ccGenomicPoints() - Add points for genomic data visualization
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ccGenomicRainfall() - Create a rainfall plot
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ccGenomicRect() - Draw rectangle for genomic data visualization
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ccGenomicText() - Add text for genomic data visualization
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ccGenomicTrack-class - S4 class ccGenomicTrack
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ccGenomicTrack() - Define a track for genomic data visualization
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ccHeatmap-class - S4 class ccHeatmap
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ccHeatmap() - Object generator for S4 class ccHeatmap
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ccHeatmapLink-class - S4 class ccHeatmapLink
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ccHeatmapLink() - Draw a link between two matrix rows in the circular heatmap
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ccLines() - Draw lines in a region
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ccLink-class - S4 class ccLink
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ccLink() - Add a link
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ccPar-class - Object generator for S4 class ccPar
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ccPar() - Parameters for the circular layout
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ccPlot-class - S4 class ccPlot
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ccPlot() - Object generator for S4 class ccPlot
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ccPoints() - Draw points in a region
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ccPolygon() - Draw polygon
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ccRaster() - Add raster image
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ccRect() - Draw rectangle in a region
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ccSegments() - Draw segments connecting points in a region
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ccText() - Draw text in a cell
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ccTrack-class - S4 class ccTrack
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ccTrack() - Define a generic track
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ccTrackGeom-class - S4 class ccTrackGeom
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ccTrackHist() - Define a track of histograms
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ccTrackLines() - Add lines on all sections of a single track.
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ccTrackPoints() - Add points on all sections of a single track.
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ccTrackText() - Add texts on all sections of a single track.
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ccViolin() - Draw violin plots
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ccXaxis() - Draw x-axis
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ccYaxis() - Draw y-axis
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show() - A generic function of show ccHeatmap
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show() - A generic function of show ccPlot